3'UTR-SIRF |
https://doi.org/10.1186/1471-2105-8-274 |
Mammal |
SINE |
ACLAME |
https://doi.org/10.1093/nar/gkp938 |
Archaea, Bacteria |
Plasmid, Virus |
Actinobacteriophage Database (PhagesDB) |
https://doi.org/10.1093/bioinformatics/btw711 |
Bacteria |
Prophage/Bacteriophage |
alu_ontology |
https://doi.org/10.1016/j.jbi.2016.01.010 |
Homo sapiens |
Alu, SINE |
APTEdb (Atlas of Plant Transposable Elements Database) |
https://f1000research.com/articles/10-1194/v1 |
Land Plant, Algae |
Eukaryotic Transposon |
ARDB (Antibiotic Resistance Genes Database) |
https://doi.org/10.1093/nar/gkn656 |
Archaea, Bacteria |
AMR/Antibiotic Resistance |
ArTEDB (Arthropod Transposable Elements Database) |
https://doi.org/10.3390/genes10050338 |
Arthropod |
Eukaryotic Transposon |
Bamboo Microsatellite Database |
https://doi.org/10.1038/srep08018 |
Phyllostachys |
Simple Sequence Repeat/Microsatellite |
BanSatDB (Banana Satellite Database) |
https://doi.org/10.1016/j.cj.2018.01.005 |
Musa |
Simple Sequence Repeat/Microsatellite |
Bivalvia_TEs |
https://doi.org/10.1186/s12915-023-01632-z |
Bivalvia |
Eukaryotic Transposon |
BMTEdb (Bombyx mori Transposable Elements Database) |
https://doi.org/10.1093/database/bat055 |
Bombyx mori |
Eukaryotic Transposon |
Boechera Microsatellite Database |
https://doi.org/10.1093/database/baw169 |
Boechera |
Simple Sequence Repeat/Microsatellite |
Brassica TE Db |
https://doi.org/10.1186/1756-0500-7-379 |
Brassica rapa, Brassica oleracea |
Eukaryotic Transposon |
BuffSatDB (Buffalo Satellite Database) |
https://doi.org/10.1186/1471-2164-14-43 |
Bubalis bubalis |
Simple Sequence Repeat/Microsatellite |
CAGm (Comparative Analysis of Germline Microsatellites) |
https://doi.org/10.1093/nar/gky969 |
Homo sapiens |
Simple Sequence Repeat/Microsatellite |
CARD (Comprehensive Antibiotic Resistance Database) |
https://doi.org/10.1093/nar/gkz935 |
Archaea, Bacteria |
AMR/Antibiotic Resistance |
CarnationDB |
https://doi.org/10.1093/dnares/dst053 |
Plant, Dianthus |
Eukaryotic Repeat |
CGATE (Catalogue of Genes Affected by Transposable Elements) |
https://doi.org/10.1186/1759-8753-3-9 |
Plant, Animal |
Eukaryotic Transposon |
ChloroMitoSSRDB 2.0 |
https://doi.org/10.1093/database/bav084 |
Eukaryote |
Organelle Microsatellite |
CicerSpTEdb (Cicer Species TE Database |
https://doi.org/10.1371/journal.pone.0259540 |
Plant, Cicer |
Eukaryotic Transposon |
CicerSpTEdb 2.0 (Cicer Species TE Database |
https://doi.org/10.1007/978-1-0716-3389-2_6 |
Plant, Cicer |
Eukaryotic Transposon |
CiArMiSatDB (Cicer arietinum Microsattellite Database) |
https://doi.org/10.1186/1471-2105-15-212 |
Plant, Cicer |
Simple Sequence Repeat/Microsatellite |
CMD (Cotton Microsatellite Database) |
https://doi.org/10.1186/1471-2164-7-132 |
Gossypium |
Simple Sequence Repeat/Microsatellite |
CmMDb (Cucumis melo Microsatellite Database) |
https://doi.org/10.1371/journal.pone.0118630 |
Cucumis melo |
Simple Sequence Repeat/Microsatellite |
Colouration mutations in animals |
https://doi.org/10.1016/j.tig.2023.04.005 |
Animal |
Eukaryotic Transposon |
ConTEdb (Conifer Transpoable Elements Database) |
https://doi.org/10.1093/database/bay131 |
Picea |
Eukaryotic Transposon |
CyanoSat |
https://doi.org/10.1007/s11274-016-2061-0 |
Cyanobacteria |
Simple Sequence Repeat/Microsatellite |
dbRIP (Database of Retrotransposon Insertion Polymorphisms) |
https://doi.org/10.1002/humu.20307 |
Homo sapiens |
Eukaryotic Retrotransposon |
Dfam |
https://doi.org/10.1093/nar/gkv1272 |
Eukaryote |
Eukaryotic Repeat |
Dfam Respository |
https://doi.org/10.1093/nar/gkv1272 |
Vertebrate |
Eukaryotic Repeat |
Digs for EVEs Db |
https://www.researchgate.net/project/DIGS-for-EVEs |
Vertebrate |
EVE/Endogenous Viral Element |
DPTEdb (Dioecious Plants Transposable Elements Database) |
https://doi.org/10.1093/database/baw078 |
Dioecious Plant |
Eukaryotic Transposon |
DROPOSON |
https://doi.org/10.1093/bioinformatics/13.1.61 |
Drosophila |
Eukaryotic Transposon |
Drosophila TEs Github |
|
Drosophila |
Eukaryotic Transposon |
efam |
https://doi.org/10.1093/bioinformatics/btab451 |
All |
Virus |
Eggplant Microsatellite Database |
https://doi.org/10.3389/fpls.2018.00401 |
Solanum melogena |
Simple Sequence Repeat/Microsatellite |
EnHERV |
https://doi.org/10.1371/journal.pone.0177119 |
Homo sapiens |
ERV/Endogenous Retrovirus |
EuGI (Eukaryotic Genomic Islands) |
https://doi.org/10.1186/s12864-018-4724-8 |
Eukaryote |
Genomic Island |
euL1db (European LINE1Hs Database) |
https://doi.org/10.1093/nar/gku1043 |
Homo sapiens |
LINE1, LINE/non-LTR Retrotransposon |
EuMicroSatdb (Eukaryotic Microsatellite Database) |
https://doi.org/10.1186/1471-2164-8-225 |
Eukaryote |
Simple Sequence Repeat/Microsatellite |
FabriEVEs |
https://doi.org/10.1101/529354 |
Animal |
EVE/Endogenous Viral Element |
FishMicrosat |
https://doi.org/10.1186/1471-2164-14-630 |
Fish |
Simple Sequence Repeat/Microsatellite |
FishTEDB |
https://doi.org/10.1093/database/bax106 |
Fish |
Eukaryotic Transposon |
FlyTE |
|
Drosophila melanogaster |
Eukaryotic Transposon |
Foxtail millet Transposable Elements-based Marker Database |
https://doi.org/10.1093/dnares/dsu039 |
Setaria italica |
Eukaryotic Transposon |
Galileo AMR |
https://doi.org/10.1093/jac/dkx513 |
Bacteria |
Prokaryotic MGE |
Gebret (Genome-Wide Browser for Retroelements) |
https://doi.org/10.1007/s13258-011-0103-4 |
Primate |
Eukaryotic Transposon |
gEVE |
https://doi.org/10.1093/database/baw087 |
Mammal |
EVE/Endogenous Viral Element |
GinMicrosatDb |
https://doi.org/10.1007/s12298-018-0558-8 |
Sesamum indicum |
Simple Sequence Repeat/Microsatellite |
Globe Artichoke Microsatellite Database |
https://doi.org/10.17660/ActaHortic.2016.1147.41 |
Cynara cardunculus |
Simple Sequence Repeat/Microsatellite |
Group I Intron Database |
https://doi.org/10.1093/nar/gkm766 |
Bacteria |
Group I Mobile Intron |
Gramene Microsatellites |
https://doi.org/10.1093/nar/gkq1148 |
Oryza |
Simple Sequence Repeat/Microsatellite |
GrTEdb (Gossypium raimondii Transposable Elements Database) |
https://doi.org/10.1093/database/bax013 |
Gossypium raimondii |
Eukaryotic Transposon |
GtRNAdb (Genomic tRNA Database) |
https://doi.org/10.1093/nar/gkv1309 |
All |
tRNA |
GyDB 2.0 (Gypsy Database) |
https://doi.org/10.1093/nar/gkq1061 |
Eukaryote |
LTR Retrotransposon |
HelDB |
https://doi.org/10.1111/jse.12929 |
Eukaryote |
Helitron |
HERVd |
https://doi.org/10.1093/nar/30.1.205 |
Homo sapiens |
ERV/Endogenous Retrovirus |
HERVd Atlas |
https://doi.org/10.1093/nar/gkad904 |
Homo sapiens |
ERV/Endogenous Retrovirus |
HERV Pparser |
https://doi.org/10.1080/15384101.2015.1022696 |
Homo sapiens |
ERV/Endogenous Retrovirus |
HESAS (HERVs Expression and Structure Analysis System) |
https://doi.org/10.1093/bioinformatics/bti194 |
Homo sapiens |
ERV/Endogenous Retrovirus |
HeteroGenome |
https://doi.org/10.1093/database/bau040 |
Model Eukaryote |
Simple Sequence Repeat/Microsatellite |
HTT-db (Horizontal Transposon Transfer Database) |
https://doi.org/10.1093/database/bax102 |
Animal, Plant, Fungi, Protist |
Eukaryotic Transposon |
HMEID (Human Mobile Element Insertion Database) |
https://doi.org/10.1093/nar/gkac128 |
Homo sapiens |
Eukaryotic Transposon |
ICEberg |
https://doi.org/10.1093/nar/gkad935 |
Bacteria |
ICE/Integrative and Conjugative Element |
iMITEDB (Insect MITE Database) |
https://doi.org/10.1093/database/baw148 |
Insecta |
MITE, ITR/TIR/DNA Transposon |
ImmeDB |
https://doi.org/10.1371/journal.pone.0223680 |
Bacteria |
Prokaryotic MGE |
ImtRDB (Imperfect Mitochondrial Repeats Database) |
https://doi.org/10.1186/s12864-019-5536-1 |
Metazoa |
Mitochondrial Repeat |
InpactorDB |
https://doi.org/10.1007/978-1-0716-3389-2_3 |
Plant |
LTR Retrotransposon |
INPHARED |
https://doi.org/10.1089/phage.2021.0007 |
Bacteria |
Prophage/Bacteriophage |
intact-LTR-RTs |
https://doi.org/10.1038/s41597-021-00968-x |
Land Plant |
LTR Retrotransposon |
InSatDb (Insect Satellite Database) |
https://doi.org/10.1093/nar/gkl778 |
Insecta |
Simple Sequence Repeat/Microsatellite |
Integrall |
https://doi.org/10.1093/bioinformatics/btp105 |
Bacteria |
Integron |
Intein Database |
https://doi.org/10.1093/nar/30.1.383 |
Bacteria |
Intein |
ISFinder |
https://doi.org/10.1093/nar/gkj014 |
Archaea, Bacteria |
IS Element, Archaeal/Bacterial Transposon |
Islander |
https://doi.org/10.1093/nar/gku1072 |
Prokaryote |
Genomic Island |
Kazusa Marker DataBase |
https://doi.org/10.1270/jsbbs.64.264 |
Land Plant |
Simple Sequence Repeat/Microsatellite |
L1Base |
https://doi.org/10.1093/nar/gkw925 |
Mammal |
LINE1, LINE/non-LTR Retrotransposon |
LAGLIDADG Enzyme Db |
https://doi.org/10.1093/nar/gks365 |
Bacteria |
Homing Endonuclease |
LeishMicrosatDB |
https://doi.org/10.1093/database/bau078 |
Leishmania |
Simple Sequence Repeat/Microsatellite |
LINE fusion genes |
https://doi.org/10.1186/1471-2164-7-139 |
Homo sapiens |
LINE/non-LTR Retrotransposon |
MacroPopGen (Microsatellite Population Genetics Database) |
https://doi.org/10.1038/s41597-019-0024-7 |
Homo sapiens |
Simple Sequence Repeat/Microsatellite |
Maize TE Consortium |
|
Zea mays |
Repeat |
Maize TE Database |
|
Zea mays |
Eukaryotic Transposon |
MasiveDB |
https://doi.org/10.1186/1471-2164-13-158 |
Plant |
Sirevirus, LTR Retrotransposon |
MDTE DB (MicroRNAs Derived from Transposable Elements Database) |
https://doi.org/10.1109/TCBB.2015.2511767 |
Mammal |
Eukaryotic Transposon |
Microorganisms Tandem Repeats Database |
|
|
Tandem Repeat |
Microsatellites/Tandem Repeats database |
|
Archaea, Bacteria |
Simple Sequence Repeat/Microsatellite |
MICdb (Microsatellites Database) |
https://doi.org/10.1093/nar/gkg002 |
Bacteria |
Simple Sequence Repeat/Microsatellite |
microTranspogene |
https://doi.org/10.1093/nar/gkm949 |
|
|
MitoSatPlant |
https://doi.org/10.1016/j.mito.2014.02.002 |
Plant |
Mitochondrial Microsatellite |
MMDB (Magnaporthe Microsatellite Database) |
https://doi.org/10.6026/97320630012388 |
Magnaporthe oryzae |
Simple Sequence Repeat/Microsatellite |
MMDBJ (Mouse Microsatellite Database of Japan) |
https://doi.org/10.1538/expanim.53.151 |
Mus musculus |
Simple Sequence Repeat/Microsatellite |
MMSat |
https://doi.org/10.1016/j.gene.2007.11.007 |
Eukaryote, Archaea, Bacteria, Virus |
Simple Sequence Repeat/Microsatellite, Minisatellite |
MnTEdb (Morus notabilis Transposable Elements Database) |
https://doi.org/10.1093/database/bav004 |
Morus notabilis |
Eukaryotic Transposon |
mobileOG-db (Mobile Orthologous Groups Database) |
https://doi.org/10.1101/2021.08.27.457951 |
Archaea, Bacteria |
Prophage/Bacteriophage, Archaeal/Bacterial Transposon, IS Element, Plasmid |
Mosquito Transposon Database |
|
Animal, Culicidae |
Eukaryotic Transposon |
MRD (Microsatellite Repeats Database) |
https://doi.org/10.1186/gb-2002-3-12-preprint0011 |
Eukaryote, Archaea, Bacteria |
Simple Sequence Repeat/Microsatellite |
MSDB (Microsatellite Database) |
https://doi.org/10.1093/gbe/evx132 |
All |
Simple Sequence Repeat/Microsatellite |
msRepDB |
https://doi.org/10.1093/nar/gkab563 |
Eukaryote, Archaea, Bacteria |
Repeat |
MusatransSSRDB (Musa Transcriptome Simple Sequence Repeat Database) |
https://doi.org/10.1007/s12038-018-9819-5 |
Musa |
Simple Sequence Repeat/Microsatellite |
MycoMeth Repeats |
https://doi.org/10.1038/s41559-019-0810-9 |
Fungi |
Eukaryotic Transposon |
OGDD (Olive Genetic Diversity Database) |
https://doi.org/10.1093/database/bav090 |
Olea europaea |
Simple Sequence Repeat/Microsatellite |
Orthoptera-TElib |
https://doi.org/10.1186/s13100-024-00316-x |
Orthoptera |
Eukaryotic Transposon |
Oryza and Gramineae Repeat Database |
https://doi.org/10.1093/nar/gkh099 |
Oryza |
Repeat |
P-MITE (Plant MITEs) |
https://doi.org/10.1093/nar/gkt1000 |
Plant |
MITE, ITR/TIR/DNA Transposon |
Papaya Repeat Database |
https://doi.org/10.1007/978-1-4614-8087-7_13 |
Carica papaya |
Repeat |
Pathogenicity Island Database |
https://doi.org/10.1093/nar/gku985 |
Archaea, Bacteria |
Pathogenicity Island |
PGSB Repeat Database/mipsREDdat |
https://doi.org/10.1093/nar/gkv1130 |
Plant |
Repeat |
Phisite |
https://doi.org/10.1093/nar/gkp911 |
Archaea, Bacteria |
Prophage/Bacteriophage |
PIPEMicroDB (Pigeonpea Microsatellite Database) |
https://doi.org/10.1093/database/bas054 |
Cajanus cajan |
Simple Sequence Repeat/Microsatellite |
piRNAclusterDB |
https://doi.org/10.1093/nar/gkab622 |
Eukaryote |
piRNA |
piRNA-IPdb |
https://doi.org/10.1093/database/bay078 |
Eukaryote |
piRNA |
PlaNC-TE (Plant Non-Coding RNA from Transposable Elements) |
https://doi.org/10.1093/database/bay078 |
Plant |
Eukaryotic Transposon |
PlantLTRdb |
https://doi.org/10.3389/fpls.2023.1134627 |
Plant |
LTR Retrotransposon |
Plant Repeat Database |
https://doi.org/10.1093/nar/gkh099 |
Plant |
|
PlanTEmir DB (Plant Transposable Elements and microRNA Database) |
https://doi.org/10.1007/s10142-016-0480-5 |
Plant |
Eukaryotic Transposon |
PlanTEnrichment |
https://doi.org/10.1016/j.ygeno.2017.05.008 |
Plant |
Eukaryotic Transposon |
PlantSat |
https://doi.org/10.1093/bioinformatics/18.1.28 |
Plant |
Simple Sequence Repeat/Microsatellite |
PlantRep (Plant Repeats) |
https://doi.org/10.1007/s00299-021-02817-y |
Land Plant, Algae |
Simple Sequence Repeat/Microsatellite |
Plasmid ATLAS |
https://doi.org/10.1093/nar/gky1073 |
Archaea, Bacteria |
Repeat |
Plasmid Database |
https://doi.org/10.1128/MRA.01325-18 |
Archaea, Bacteria |
Plasmid |
PLSDB |
https://doi.org/10.1093/nar/gky1050 |
Archaea, Bacteria |
Plasmid |
PMDbase (Plant Microsatellite Database) |
https://doi.org/10.1093/nar/gkw906 |
Plant |
Simple Sequence Repeat/Microsatellite |
pMLST |
https://doi.org/10.12688/wellcomeopenres.14826.1 |
Archaea, Bacteria |
Plasmid |
proMGE |
https://doi.org/10.1093/nar/gkac163 |
Archaea, Bacteria |
IS Element, Archaeal/Bacterial Transposon, Integron, Prophage/Bacteriophage, ICE/Integrative and Conjugative Element, Mobility Island |
ProphageDB |
https://doi.org/10.1007/978-3-540-37256-1_110 |
Archaea, Bacteria |
Prophage/Bacteriophage |
Pseudofam |
https://doi.org/10.1093/nar/gkn758 |
Metazoa |
Pseudogene |
PSID |
|
|
Simple Sequence Repeat/Microsatellite |
PSMD (Pan-Species Microsaetllite Database) |
https://doi.org/10.1111/1755-0998.13098 |
All |
Simple Sequence Repeat/Microsatellite |
PSSRD (Plant Simple Sequence Repeat Database) |
https://doi.org/10.1038/s41438-021-00562-7 |
Plant |
Simple Sequence Repeat/Microsatellite |
PTGBase (Plant Tandem-Duplicated Gene Database) |
https://doi.org/10.1093/database/bav017 |
Plant |
Tandem Duplicated Gene |
pVOG (Prokaryotic Virus Orthologous Groups) |
https://doi.org/10.1093/nar/gkw975 |
Archaea, Bacteria |
Prophage/Bacteriophage, Virus |
Repbase |
https://doi.org/10.1186/s13100-015-0041-9 |
Eukaryote |
Eukaryotic Transposon |
REPEATOME |
https://genominfo.org/journal/view.php?number=356 |
Homo sapiens, Pan troglodytes |
Repeat |
RepetDB |
https://doi.org/10.1186/s13100-019-0150-y |
Plant, Fungi |
Eukaryotic Transposon |
RepPop (Repeats of Populus) |
https://doi.org/10.1186/1471-2164-10-14 |
Populus trichocarpa |
Eukaryotic Transposon |
Restriction Enzyme Db |
http://doi.org/10.1093/nar/gku1046 |
Archaea, Bacteria |
Restriction Endonuclease |
Retrobase |
|
Fungi |
Eukaryotic Transposon |
RetrogeneDB2 |
|
Animal, Plant |
Pseudogene |
Retroryza |
https://doi.org/10.1093/nar/gkl780 |
Oryza |
LTR Retrotransposon |
REXdb (RepeatExplorer Database) |
https://doi.org/10.1186/s13100-018-0144-1 |
Viridiplantae (+Metazoa in parallel db) |
protein domains of eukaryotic transposons |
RiTE-db (Rice TE Database) |
https://doi.org/10.1186/s12864-015-1762-3 |
Oryza |
Eukaryotic Transposon |
RTFAdb (Retrotransposon and Transcription Factor Database) |
https://doi.org/10.1016/j.ygeno.2017.11.002 |
Homo sapiens, Mus musculus |
Eukaryotic Retrotransposon |
RTRIP (Rice Transposon Insertion Polymorphism) |
https://doi.org/10.1111/pbi.13425 |
Oryza sativa |
Eukaryotic Transposon |
Satellog |
https://doi.org/10.1186/1471-2105-6-145 |
Homo sapiens |
Satellite |
SBCDDB |
https://doi.org/10.1093/nar/gkx956 |
Homo sapiens, Mus musculus |
Sleeping Beauty, ITR/TIR/DNA Transposon |
SIlkSatDb |
https://doi.org/10.1093/nar/gki099 |
Bombyx mori |
Simple Sequence Repeat/Microsatellite |
SINEBase |
https://doi.org/10.1093/nar/gks1263 |
Eukaryote |
SINE |
SisatDatabase |
|
Sesamum |
Simple Sequence Repeat/Microsatellite |
SNPSTR (SNPs and Short Tandem Repeats) |
https://doi.org/10.1093/nar/gkl806 |
Vertebrate |
Simple Sequence Repeat/Microsatellite |
SoyTEdb |
https://doi.org/10.1186/1471-2164-11-113 |
Glycine |
Eukaryotic Transposon |
SoyTIPdb |
https://doi.org/10.1093/plphys/kiad386 |
Glycine |
Eukaryotic Transposon |
SPTEDB (Salix and Populus Transposable Elements Database) |
https://doi.org/10.1093/database/bay024 |
Populus, Salix |
Eukaryotic Transposon |
SSRD (Simple Sequence Repeats Database) |
http://doi.org/10.1002/cfg.289 |
Homo sapiens |
Simple Sequence Repeat/Microsatellite |
SSRdatabase |
|
Tree |
Simple Sequence Repeat/Microsatellite |
SSRome |
https://doi.org/10.1093/nar/gky998 |
All |
Simple Sequence Repeat/Microsatellite |
STRBase (Short Tandem Repeats Database) |
https://doi.org/10.1093/nar/29.1.320 |
Mammal |
Simple Sequence Repeat/Microsatellite |
Sugar Beet Microsatellite Database |
https://doi.org/10.1093/database/bav111 |
Beta vulgaris |
Simple Sequence Repeat/Microsatellite |
Swiss Vitis Microsatellite Database |
https://doi.org/10.17660/ActaHortic.2009.827.82 |
Vitis |
Simple Sequence Repeat/Microsatellite |
TADB (Toxin-Antitoxin Loci Database) |
https://doi.org/10.1093/nar/gkad962 |
Archaea, Bacteria |
Toxin-Antitoxin Loci |
TarpiD |
https://doi.org/10.1039/d3mo00098b |
Eukaryotes |
piRNA |
TaSSRDb (Triticum aestivum Simple Sequence Repeats Database) |
https://doi.org/10.3389/fpls.2017.02009 |
Triticum aestivum |
Simple Sequence Repeat/Microsatellite |
TeCD |
https://doi.org/10.1186/s12864-023-09135-5 |
Eukaryote |
eccDNA |
TEFam |
|
Mosquito |
Eukaryotic Transposon |
TEMM |
https://doi.org/10.1007/978-1-0716-3389-2_4 |
Plant |
Eukaryotic Transposon |
Tick Transposon Database |
|
Ixodida |
Eukaryotic Transposon |
TIDAL-FLY (Transposon Insertion and Depletion Analyzer) |
https://doi.org/10.1093/nar/gkv1193 |
Drosophila |
|
TIGR Maize TE Database |
https://doi.org/10.1093/nar/gkj072 |
Zea mays |
Eukaryotic Transposon |
Tn Transposon Registry |
https://doi.org/10.1186/s13100-019-0182-3 |
Archaea, Bacteria |
Archaeal/Bacterial Transposon |
TnCentral |
https://doi.org/10.1128/mbio.02060-21 |
Archaea, Bacteria |
Archaeal/Bacterial Transposon, IS Element |
Tobacco Markers and Primers Database |
https://doi.org/10.1186/s12864-018-4878-4 |
Nicotiana |
Simple Sequence Repeat/Microsatellite |
TranspoGene |
https://doi.org/10.1093/nar/gkm949 |
|
|
TransposonDB |
https://doi.org/10.1093/nar/gkac136 |
Animal, Plant, Fungi, Protist |
Eukaryotic Transposon |
TRbase (Tandem Repeat Database) |
https://doi.org/10.1093/bioinformatics/bti059 |
Homo sapiens |
Tandem Repeat |
TRedD (Tandem Repeats over the Edit Distance) |
https://doi.org/10.1093/database/baq003 |
Homo sapiens |
Tandem Repeat |
TREP (Transposable Elements Platform) |
https://doi.org/10.1016/S1360-1385(02)02372-5 |
Animal, Plant, Fungi, Protist |
Eukaryotic Transposon |
TRDB (Tandem Repeats Database) |
https://doi.org/10.1093/nar/27.2.573 |
All |
Tandem Repeat |
UgMicroSatdb (Unigene Microsatellite Database) |
https://doi.org/10.1093/nar/gkm811 |
|
Simple Sequence Repeat/Microsatellite |
VigSatDB (Vigna Satellite Database) |
https://doi.org/10.1093/database/baz055 |
Vigna |
Simple Sequence Repeat/Microsatellite |
Viral Microsatellite Database |
|
Virus |
Simple Sequence Repeat/Microsatellite |
Yeast Transposons |
|
Saccharomyces |
LTR Retrotransposon |